...
Original Mummer | Modified Code |
---|---|
Highly similar distribution of points and sequence alignments | Highly similar distribution of points and sequence alignments |
Y-axis is longer - perhaps all alignments were considered | Y-axis is shorter - selectively most alignments considered |
More compact and prevalent vertical grid lines | Vertical gridlines are sparser, lightly shaded regions between compared genomes - more visually appealing |
Shorter x-axis tick length for rightmost xtick denoting genomes with prefix 'tig' - variable sequence alignment considerations between the 2 plots | Longer x-axis tick length for rightmost xtick denoting genomes with prefix 'tig' - variable sequence alignment considerations between the 2 plots |
Perhaps the optional --filter option was not selected | Perhaps the optional --filter option was selected |
Assembly_2_vs_pangenome__fasta.delta
Original Mummer | Modified Code |
---|---|
Highly similar distribution of points and sequence alignments | Highly similar distribution of points and sequence alignments |
Y-axis is longer - perhaps all alignments were considered | Y-axis is shorter - selectively most alignments considered |
More compact and prevalent vertical grid lines | Vertical gridlines are sparser, lightly shaded regions between compared genomes - more visually appealing |
Almost similar x-axis tick length for rightmost xtick denoting genomes with prefix 'tig' - sequence alignment considerations between plots nearly identical | Almost similar x-axis tick length for rightmost xtick denoting genomes with prefix 'tig' - sequence alignment considerations between plots nearly identical |
Perhaps the optional --filter option was not selected | Perhaps the optional --filter option was selected |
Assembly_3_vs_pangenome__fasta.delta
Original Mummer | Modified Code |
---|---|
Highly similar distribution of points and sequence alignments | Highly similar distribution of points and sequence alignments |
Y-axis is longer - perhaps all alignments were considered | Y-axis is shorter - selectively most alignments considered |
More compact and prevalent vertical grid lines | Vertical gridlines are sparser, lightly shaded regions between compared genomes - more visually appealing |
Shorter x-axis tick length for rightmost xtick denoting genomes with prefix 'tig' - variable sequence alignment considerations between the 2 plots | Longer x-axis tick length for rightmost xtick denoting genomes with prefix 'tig' - variable sequence alignment considerations between the 2 plots |
Perhaps the optional --filter option was not selected | Perhaps the optional --filter option was selected |