This should be a list of ALL software products created and/or supported by NCSA! Please contribute! 2017 list is here.
- BrownDog - A prototype Data Transformation Service (DTS) built on Clowder and Polyglot
- Innovation(s): Transformations as a Service, Sharing data transformation capabilities
- Cactus - Open source problem solving environment designed for scientists and engineers, with a modular structure that easily enables parallel computation across different architectures and collaborative code development between different groups
- CILogon - Federated identity and access management for science collaborations
- ClassTranscribe - Rob Kooper
- Clowder - An opensource, broadly customizable, web based content management system supporting an analysis and metadata enrichment via its extraction bus
- Innovation(s): Active curation, Automatic metadata enrichment, open source broadly customizable data management
- COmanage - An Identity Management System (IdMS) designed for collaborative organizations
- CoverCrop - Christopher Navarro
- Crops in Silico - Meagan Lang Sara Lambert Michael Bobak
- DataWolf - Web based scientific workflow system
- Innovation(s): Models as a Service, scientific reproducibility, scientific workflows
- DES Labs - Suite of web apps and tools to access, analyze and visualize data from astronomical surveys to speed the scientific discovery process
- DigiPath_MLTK - package module to prepare clinical tissue slide images for machine learning, by leveraging the openslide library for usage with tensorflow 2.0.
- easyaccess - SQL command-line interpreter for astronomical surveys
- Eclipse PTP - Eclipse plugin supporting the development and debugging of parallel tools on various HPC resources
- EIF - Extended Isolation Forest for Anomaly Detection
- Einstein Toolkit - Community-driven software platform of core computational tools to advance and support research in relativistic astrophysics and gravitational physics
- ERGO - Hazard modeling and management service allowing responders to rapidly address emergency scenarios (e.g. earthquakes, tornadoes, fires, etc.)
- Euler - Open source toolkit, mostly written in Python, for merging taxonomies and visualizing the results
- Farmdoc - Open source, web-based farm program decision support tools for farmers, academics and policymakers.
- flimview - Python package for analysis of FLIM images in collaboration with COMI Lab
- GeoDashboard - Customizable portal allowing users to navigate, download, and visualize field sensor data
- GSI-OpenSSH - GSI-OpenSSH is a modified version of OpenSSH that adds support for GSI authentication and credential forwarding (delegation), providing a single sign-on remote login and file transfer service
- ISLET - Isolated, Scalable, & Lightweight Environment for Training
- Keras Spatial - Aiman Soliman
- Kurator - Provenance-enabled workflow platform and toolkit to curate biodiversity data
- Mayomics - The best practices genomic variant calling workflow implemented in Cromwell/WDL for a production clinical environment.
- MyProxy - Software for managing X.509 Public Key Infrastructure (PKI) security credentials (certificates and private keys)
- NDS Workbench - “App Store” for data management and analysis tools
- NEST - Colleen Bushell Matt Berry
- Omix - Colleen Bushell Matt Berry
- Parsl - A parallel scripting library for Python
- Innovation(s): Scientific reproducibility, scientific workflows
- PEcAn - Gateway for Ecological modeling & sensitivity analysis
- Innovation(s): Ecological forecasting
- Partiview - Stuart Levy
- Polyglot - “Universal" distributed file format conversion capabilities as a service
- Innovation(s): Imposed Code Reuse
- psync - Parallel synchronization for locally mounted file systems
- ServiceX - Benjamin Galewsky
- SKOPE - Provides Synthesized Knowledge of Past Environments to diverse research communities
- WIX - Colleen Bushell Matt Berry
- Whole Tale - Infrastructure to help enable researchers to examine, transform, and then seamlessly republish research data that was used in an article
- Innovation(s): Software publication, scientific reproducibility
- Virtual Director - Virtual reality interface that enables gestural motion capture and voice control of navigation, editing, and recording in the CAVE, ImmersaDesk, and Infinity Wall
- vizic - A Jupyter-based Interactive Visualization Tool for Astronomical Catalogs
- XRAS- Web-based resource allocation and user management software used in XSEDE
- YesWorkflow - Brings scientific workflow modeling and provenance management to scripting languages
- yt - Open-source, permissively-licensed python package for analyzing and visualizing volumetric data
- ytini - Visualization middleware between yt (above) and the visual effects software, Houdini; allows Houdini to read and render various scientific data formats.
- Zeek - Network analysis framework and Intrusion Detection System
- 3D Utilities - Library of 3D file format data loaders (leveraging NCSA Portfolio)
Legacy
- Census Data Portal - Portal to index and access the handwritten contents of the digitized 1930s and 1940s census data
- Conversion Software Registry - Online database of software according to file formats they open/save
- Daffodil - Open source implementation of Data Format Description Language (now Apache project)
- Innovation(s): Machine readable data format descriptions
- D2K - Colleen Bushell (spun off commercially)
- Doc2Learn - Functionality to do side-by-side visual as well as automatic comparisons of documents
- Habanero - A collaborative framework and environment containing a set of applications to use, and APIs to convert applications into collaborative applications
- HDF - A set of portable scientific data file formats designed to store and organize large amounts of data (spun off as not-for-profit)
- httpd - Early web server, powered most of the web as of August 1995 (now Apache project)
- Im2Learn - Image analysis library
- Ip2Learn - Simulation framework that is designed for understanding preservation and reconstruction archival requirements for a class of decisions based on image inspection.
- MarketMaker - Dashboard to manage local food production/distribution (spun off commercially)
- NCSA Mosaic - The first popular web browser (spun off commercially)
- PerfSuite - A collection of tools, utilities, and libraries for software performance analysis where the primary design goals are ease of use, comprehensibility, interoperability, and simplicity
- NCSA Portfolio - A 3D library for building applications
- SP2Learn - Framework for accurate estimation of geospatial models from sparse field measurements using image processing and machine learning
- NCSA Telnet - The first implementation of the telnet protocol for the Macintosh or a PC that provided the ability to connect to multiple hosts simultaneously
- Tupelo - Data and metadata management system based on semantic web technologies
- Innovation(s): Semantic web
- Versus - Distributed framework for storing and serving up components for content based comparisons
- Innovation(s): Composable content based comparisons