This should be a list of ALL software products created and/or supported by NCSA!  Please contribute!  2017 list is here.

• BrownDog - A prototype Data Transformation Service (DTS) built on Clowder and Polyglot
  • Innovation(s): Transformations as a Service, Sharing data transformation capabilities
• Cactus - Open source problem solving environment designed for scientists and engineers, with a modular structure that easily enables parallel computation across different architectures and collaborative code development between different groups
• CILogon - Federated identity and access management for science collaborations
• ClassTranscribe - Rob Kooper
• Clowder - An opensource, broadly customizable, web based content management system supporting an analysis and metadata enrichment via its extraction bus
  
  • Innovation(s): Active curation, Automatic metadata enrichment, open source broadly customizable data management
• COmanage - An Identity Management System (IdMS) designed for collaborative organizations
• CoverCrop - Christopher Navarro
• Crops in Silico - Meagan Lang Sara Lambert Michael Bobak
• DataWolf - Web based scientific workflow system
  • Innovation(s): Models as a Service, scientific reproducibility, scientific workflows
• DES Labs - Suite of web apps and tools to access, analyze and visualize data from astronomical surveys to speed the scientific discovery process
• DigiPath_MLTK - package module to prepare clinical tissue slide images for machine learning, by leveraging the openslide library for usage with tensorflow 2.0.
• easyaccess - SQL command-line interpreter for astronomical surveys
• Eclipse PTP - Eclipse plugin supporting the development and debugging of parallel tools on various HPC resources
• EIF - Extended Isolation Forest for Anomaly Detection
• Einstein Toolkit - Community-driven software platform of core computational tools to advance and support research in relativistic astrophysics and gravitational physics 
  
• ERGO - Hazard modeling and management service allowing responders to rapidly address emergency scenarios (e.g. earthquakes, tornadoes, fires, etc.)
• Euler - Open source toolkit, mostly written in Python, for merging taxonomies and visualizing the results
• Farmdoc - Open source, web-based farm program decision support tools for farmers, academics and policymakers. 
• flimview - Python package for analysis of FLIM images in collaboration with COMI Lab
• GeoDashboard - Customizable portal allowing users to navigate, download, and visualize field sensor data
• GSI-OpenSSH - GSI-OpenSSH is a modified version of OpenSSH that adds support for GSI authentication and credential forwarding (delegation), providing a single sign-on remote login and file transfer service
• ISLET - Isolated, Scalable, & Lightweight Environment for Training
• Keras Spatial - Aiman Soliman
• Kurator - Provenance-enabled workflow platform and toolkit to curate biodiversity data
• Mayomics - The best practices genomic variant calling workflow implemented in Cromwell/WDL for a production clinical environment. 
• MyProxy - Software for managing X.509 Public Key Infrastructure (PKI) security credentials (certificates and private keys)
• NDS Workbench - “App Store” for data management and analysis tools
• NEST - Colleen Bushell Matt Berry
• Omix - Colleen Bushell Matt Berry
• Parsl - A parallel scripting library for Python
  
  • Innovation(s): Scientific reproducibility, scientific workflows
• PEcAn - Gateway for Ecological modeling & sensitivity analysis
  • Innovation(s): Ecological forecasting
• Partiview - Stuart Levy
• Polyglot - “Universal" distributed file format conversion capabilities as a service
  
  • Innovation(s): Imposed Code Reuse
• psync - Parallel synchronization for locally mounted file systems
• ServiceX - Benjamin Galewsky
• SKOPE - Provides Synthesized Knowledge of Past Environments to diverse research communities
• WIX - Colleen Bushell Matt Berry
• Whole Tale - Infrastructure to help enable researchers to examine, transform, and then seamlessly republish research data that was used in an article
  
  • Innovation(s): Software publication, scientific reproducibility
• Virtual Director - Virtual reality interface that enables gestural motion capture and voice control of navigation, editing, and recording in the CAVE, ImmersaDesk, and Infinity Wall
• vizic - A Jupyter-based Interactive Visualization Tool for Astronomical Catalogs
• XRAS- Web-based resource allocation and user management software used in XSEDE
• YesWorkflow - Brings scientific workflow modeling and provenance management to scripting languages
• yt - Open-source, permissively-licensed python package for analyzing and visualizing volumetric data
• ytini - Visualization middleware between yt (above) and the visual effects software, Houdini; allows Houdini to read and render various scientific data formats.
• Zeek - Network analysis framework and Intrusion Detection System
• 3D Utilities - Library of 3D file format data loaders (leveraging NCSA Portfolio)

Legacy

• Census Data Portal - Portal to index and access the handwritten contents of the digitized 1930s and 1940s census data
• Conversion Software Registry - Online database of software according to file formats they open/save
• Daffodil -  Open source implementation of Data Format Description Language (now Apache project)
  • Innovation(s): Machine readable data format descriptions
• D2K - Colleen Bushell (spun off commercially)
• Doc2Learn - Functionality to do side-by-side visual as well as automatic comparisons of documents
• Habanero - A collaborative framework and environment containing a set of applications to use, and APIs to convert applications into collaborative applications
• HDF - A set of portable scientific data file formats designed to store and organize large amounts of data (spun off as not-for-profit)
• httpd - Early web server, powered most of the web as of August 1995 (now Apache project)
• Im2Learn - Image analysis library
• Ip2Learn - Simulation framework that is designed for understanding preservation and reconstruction archival requirements for a class of decisions based on image inspection.
• MarketMaker - Dashboard to manage local food production/distribution (spun off commercially)
  
• NCSA Mosaic - The first popular web browser (spun off commercially)
• PerfSuite - A collection of tools, utilities, and libraries for software performance analysis where the primary design goals are ease of use, comprehensibility, interoperability, and simplicity
• NCSA Portfolio - A 3D library for building applications
• SP2Learn - Framework for accurate estimation of geospatial models from sparse field measurements using image processing and machine learning
• NCSA Telnet - The first implementation of the telnet protocol for the Macintosh or a PC that provided the ability to connect to multiple hosts simultaneously
• Tupelo - Data and metadata management system based on semantic web technologies
  • Innovation(s): Semantic web
• Versus - Distributed framework for storing and serving up components for content based comparisons
  • Innovation(s): Composable content based comparisons

Service Model Efforts

• ICI Services
• SSA Services