EffortStudent ProjectDescriptionSkillsContact
KnowEnGbug fixesFix bugs filed against the pipeline and platform.python (docker, Angular, TypeScript)
KnowEnGintegrate GP 3D visualizationIntegrate GP 3D visualization in platform.Angular, TypeScript/JavaScript, Unity
KnowEnG/nestCWL runnerRun CWL pipelines under nest. Potentially convert KnowEnG pipelines to CWL.python, docker, cwl
KnowEnG/nestlocal docker job executorExtend current suite of job executors (mesos, kubernetes) with new one to run on local docker.python,  docker
Mayo Coveragerxjs testsTest handling of event streams. Would serve as example for other projects.TypeScript/JavaScript (Angular, RxJs)
Mayo Coveragecomponent and e2e testsImprove component and e2e tests. Would serve as example for other projects.TypeScript/JavaScript (Angular)
CIgithub migrationMigrate from Bitbucket and Jenkins to Github.bash scripting
Mayo PROMOTEGene Module Rewiringunify four R scripts for finding, scoring, summarizing, and characterizing modules into single R packageR
nestrefactoring/library creationStart converting nest into a standalone, reusable library/tool.python
nestDocker cleanupImprove build process. Improve test running. Separate job dependencies. Improve dev workflow for debugging, pull requests, etc.Docker, python, bash scripting
nestTLS certsAutomate certificate renewals to deployed instances.bash scripting (AWS)
FSTpackage

Convert FST to python package, possibly removing last of the R dependencies.

and/or

Publish FST as docker image and replace in nest.

python (Docker, R)
VA/SD design systemcomponent libraryBuild storybook.js library (or similar) per frontend framework.React and/or Angular (and/or other frameworks the SD is using), CSS/SASSMatt Berry


Geospatial Layer for Green Infrastructure of campus
ERGO/IN-CORE

Developing 3D visualization by using NASA World Wind

Java, Eclipse RCP, DataWolf, Geospatial data/viz
ERGO/IN-CORE

Adding various geospatial data format support such as Geopackage, Geotiff, etc.

Java, Eclipse RCP, DataWolf, Geospatial data/viz
ERGO/IN-CORE

Data search/browser on Ergo repository

Java, Eclipse RCP, DataWolf, Geospatial data/viz
Clowder

Migrating authentication libraries from securesocial to silhouette

Play framework, Scala, Java, Javascript, Python, etc.
Clowder

Developing dataset level permissions (right now it's only space level)

Play framework, Scala, Java, Javascript, Python, etc.
Clowder

Redesigning dataset page to be more intuitive and streamlined (too much info on current one)

Play framework, Scala, Java, Javascript, Python, etc.
Clowder

Adding UI to upload and deploy previewers

Play framework, Scala, Java, Javascript, Python, etc.
Clowder

Developing previewers for ____ format

Play framework, Scala, Java, Javascript, Python, etc.
Clowder

Developing extractors for ____ format

Play framework, Scala, Java, Javascript, Python, etc.
Clowder

Developing Clowder datastore for GeoServer (Geospatial visualization service)

Play framework, Scala, Java, Javascript, Python, etc.
Clowder
Starter issues listed in github: https://github.com/clowder-framework/clowder/labels/good%20first%20issuePlay framework, Scala, Java, Javascript, Python, etc.Luigi Marini
DataWolf

Refactoring/Redesigning Workflow Editor with latest Javascript technology such as React, Redux, etc.

Java, Hibernate (JPA), RestEasy, Javascript, etc
DataWolf

Refactoring REST service implementation with Jersey instead of RestEasy

Java, Hibernate (JPA), RestEasy, Javascript, etc
DataWolf

Adding Unit Tests

Java, Hibernate (JPA), RestEasy, Javascript, etc
DataWolf

Adding Docker Executor

Java, Hibernate (JPA), RestEasy, Javascript, etc
DataWolf

Adding an admin view: user management

Java, Hibernate (JPA), RestEasy, Javascript, etc
DataWolf

Refactoring datasets browser (e.g. using pagination)

Java, Hibernate (JPA), RestEasy, Javascript, etc
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2 Comments

  1. will you be looking for interns?  there was some interest in this at the Tapia conference last week -

    1. Making this list to point folks at that are interested in internships.  Jay Alameda please feel free to point folks here.