Need to set one's environment like this:

login1$ cat .profile_user
#!/bin/bash
module load intel/11.1
module load java64/1.6.0
module unload mvapich2
module load openmpi
#module swap mvapich openmpi
login1$

In PTP, set:

Target system configuration: edu.utexas.tacc.lonestar.sge.batch

Queue: development

Parallel environment: 12way 12

Also, set the environment variable MY_NSLOTS to 5 by doing the following:

  1. Select the Environment tab
  2. Click New
  3. In the Name field, enter MY_NSLOTS
  4. In the Value field, enter 5
  5. Click OK to close the New Environment Variable dialog
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